Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 CLUHP6-201ENST00000580789 941 ntBASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 TNK2-208ENST00000428187 4235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.81□□□□□ -0.36
DUX4Q9UBX2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SCAF8-203ENST00000417268 4944 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TXNDC12-201ENST00000371626 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 WDR47-204ENST00000369965 4240 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 PCDHGA8-202ENST00000610569 6480 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 GHSR-202ENST00000427970 912 ntBASIC12.8□□□□□ -0.36
DUX4Q9UBX2 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC010319.3-201ENST00000597028 470 ntBASIC12.8□□□□□ -0.36
DUX4Q9UBX2 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AC007787.1-201ENST00000588095 1583 ntBASIC12.8□□□□□ -0.36
DUX4Q9UBX2 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 AL158070.2-201ENST00000623713 1621 ntBASIC12.8□□□□□ -0.36
DUX4Q9UBX2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
DUX4Q9UBX2 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 VPS13A-205ENST00000376636 11145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 COL4A6-209ENST00000545689 6380 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
DUX4Q9UBX2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms