Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 AGGF1P1-201ENST00000509500 2073 ntBASIC13.26□□□□□ -0.29
LRFN1Q9P244 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 MIR6727-201ENST00000620702 65 ntBASIC13.26□□□□□ -0.29
LRFN1Q9P244 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
LRFN1Q9P244 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
LRFN1Q9P244 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CAP2P1-201ENST00000557743 1390 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 FXNP2-201ENST00000411625 547 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 BANF1P3-201ENST00000412556 261 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 AL589843.1-201ENST00000423924 425 ntTSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 AL592076.1-201ENST00000424448 303 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 DUX4L50-201ENST00000455245 715 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SORD2P-201ENST00000558556 1069 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 AC140658.4-201ENST00000561990 352 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 PHBP15-201ENST00000574228 665 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.25□□□□□ -0.29
LRFN1Q9P244 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.25□□□□□ -0.29
LRFN1Q9P244 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
LRFN1Q9P244 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms