Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC11.02□□□□□ -0.64
VGLL1Q99990 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.02□□□□□ -0.64
VGLL1Q99990 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.64
VGLL1Q99990 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC11.02□□□□□ -0.64
VGLL1Q99990 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
VGLL1Q99990 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 DFFBP1-201ENST00000433250 979 ntBASIC11.02□□□□□ -0.65
VGLL1Q99990 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 CYMP-203ENST00000474680 1263 ntBASIC11.02□□□□□ -0.65
VGLL1Q99990 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 ENPP7P5-201ENST00000541031 1031 ntBASIC11.02□□□□□ -0.65
VGLL1Q99990 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.02□□□□□ -0.65
VGLL1Q99990 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 AP001063.1-201ENST00000568332 529 ntBASIC11.02□□□□□ -0.65
VGLL1Q99990 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 TMEM261P1-201ENST00000604899 340 ntBASIC11.02□□□□□ -0.65
VGLL1Q99990 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 HADH-202ENST00000403312 1752 ntTSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
VGLL1Q99990 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC11.02□□□□□ -0.65
VGLL1Q99990 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
VGLL1Q99990 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.02□□□□□ -0.65
VGLL1Q99990 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 AC072061.1-201ENST00000569710 2234 ntBASIC11.01□□□□□ -0.65
VGLL1Q99990 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC11.01□□□□□ -0.65
VGLL1Q99990 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 F10-203ENST00000409306 1450 ntTSL 3 BASIC11.01□□□□□ -0.65
VGLL1Q99990 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC11.01□□□□□ -0.65
VGLL1Q99990 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC11.01□□□□□ -0.65
VGLL1Q99990 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VGLL1Q99990 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.01□□□□□ -0.65
VGLL1Q99990 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
VGLL1Q99990 AC093433.1-201ENST00000458048 571 ntBASIC11.01□□□□□ -0.65
VGLL1Q99990 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
VGLL1Q99990 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.01□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms