Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 GRAMD1B-202ENST00000450171 2431 ntTSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 RNA5SP359-201ENST00000364838 113 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 RPL3P5-201ENST00000441645 1232 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 AC108724.1-201ENST00000481669 352 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 GPX3-202ENST00000517973 612 ntTSL 3 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 AC011489.1-201ENST00000586744 690 ntTSL 3 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 AC080013.5-201ENST00000607044 679 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 AC010976.2-201ENST00000609697 852 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 SLC8A1-AS1-218ENST00000610721 956 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 Metazoa_SRP.75-201ENST00000614439 293 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 MIR6746-201ENST00000620971 63 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 MIR600HG-201ENST00000449175 5984 ntBASIC14.66□□□□□ -0.06
PHOX2BQ99453 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 PRMT2-216ENST00000621201 1301 ntTSL 5 BASIC14.66□□□□□ -0.06
PHOX2BQ99453 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
PHOX2BQ99453 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CYP4F23P-201ENST00000593402 1579 ntBASIC14.65□□□□□ -0.06
PHOX2BQ99453 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC025183.3-201ENST00000623526 1482 ntBASIC14.65□□□□□ -0.06
PHOX2BQ99453 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 ATP1A4-205ENST00000470705 886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CASP3-205ENST00000517513 964 ntTSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC021546.1-201ENST00000518927 1031 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AAMDC-210ENST00000532481 690 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC017033.1-201ENST00000603720 708 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 MIR6893-201ENST00000613458 69 ntBASIC14.65□□□□□ -0.06
PHOX2BQ99453 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC020922.4-201ENST00000621389 339 ntBASIC14.65□□□□□ -0.06
PHOX2BQ99453 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
PHOX2BQ99453 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms