Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 SHMT1P1-201ENST00000419974 1312 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 TPPP3-205ENST00000564104 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 RPSAP12-201ENST00000435879 888 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 ZNF877P-201ENST00000437614 612 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC147876.1-201ENST00000504408 322 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 ACY3-202ENST00000529256 933 ntTSL 3 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC012593.1-214ENST00000586952 767 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC048382.6-201ENST00000621980 1223 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AL357143.1-203ENST00000639750 881 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AC018529.2-202ENST00000611482 3087 ntBASIC16.51■□□□□ 0.23
CDCA5Q96FF9 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CDCA5Q96FF9 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ATP5H-202ENST00000344546 553 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 AC099567.1-201ENST00000414418 931 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 EEF1DP2-201ENST00000433698 843 ntBASIC16.5■□□□□ 0.23
CDCA5Q96FF9 RHOQP2-201ENST00000449922 579 ntBASIC16.5■□□□□ 0.23
CDCA5Q96FF9 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 C11orf1-202ENST00000528125 534 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 RN7SL524P-201ENST00000581152 300 ntBASIC16.5■□□□□ 0.23
CDCA5Q96FF9 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ETV4-208ENST00000586826 917 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 AC020904.3-201ENST00000624199 442 ntBASIC16.5■□□□□ 0.23
CDCA5Q96FF9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CDCA5Q96FF9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 ERP29-202ENST00000455836 1333 ntTSL 2 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 C18orf21-202ENST00000333234 958 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CDCA5Q96FF9 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms