Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC092570.1-201ENST00000414446 469 ntBASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC092612.1-201ENST00000514501 998 ntBASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 FOXN3-AS2-201ENST00000554071 1262 ntBASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 APOC1-209ENST00000592885 562 ntTSL 3 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 AC110057.1-201ENST00000636031 898 ntBASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
SH3TC2Q8TF17 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.21■□□□□ 0.18
SH3TC2Q8TF17 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
SH3TC2Q8TF17 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
SH3TC2Q8TF17 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SH3TC2Q8TF17 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.18
SH3TC2Q8TF17 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 RANGRF-202ENST00000407006 1074 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 AL928742.1-201ENST00000497397 548 ntTSL 4 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 CHCHD2P2-201ENST00000503744 321 ntBASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 KRT18P37-201ENST00000520711 1282 ntBASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 ADM-203ENST00000525063 867 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 PMEL-214ENST00000550447 901 ntTSL 3 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 AC023968.2-201ENST00000560593 1049 ntBASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 AL591471.1-201ENST00000621855 229 ntBASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 WASH7P-201ENST00000488147 1351 ntBASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
SH3TC2Q8TF17 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 AC023908.3-201ENST00000564211 3047 ntBASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 RPL10-202ENST00000369817 1284 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC16.19■□□□□ 0.18
SH3TC2Q8TF17 RN7SL767P-201ENST00000493013 295 ntBASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms