Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CD81-209ENST00000492627 886 ntTSL 3 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 FBXO36P1-201ENST00000579006 471 ntBASIC17.12■□□□□ 0.33
SNED1Q8TER0 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC17.12■□□□□ 0.33
SNED1Q8TER0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
SNED1Q8TER0 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 AC011498.7-201ENST00000624986 2027 ntBASIC17.11■□□□□ 0.33
SNED1Q8TER0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 DBET-201ENST00000630918 3363 ntBASIC17.11■□□□□ 0.33
SNED1Q8TER0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 HNRNPA1P21-201ENST00000424115 961 ntBASIC17.11■□□□□ 0.33
SNED1Q8TER0 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 AC120498.7-201ENST00000562876 330 ntBASIC17.11■□□□□ 0.33
SNED1Q8TER0 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 AC113385.2-201ENST00000614465 762 ntBASIC17.11■□□□□ 0.33
SNED1Q8TER0 HIST1H3B-201ENST00000621411 411 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
SNED1Q8TER0 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SNED1Q8TER0 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 SALL4P6-201ENST00000429385 1691 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 RNF212-201ENST00000333673 1019 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 HDAC8-204ENST00000373560 819 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 CST1-202ENST00000398402 655 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AC073569.2-201ENST00000551995 354 ntTSL 5 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 MT3-202ENST00000561640 514 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AC079414.2-201ENST00000567157 1104 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 LINC02333-201ENST00000603464 852 ntTSL 3 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AC004686.1-201ENST00000605113 538 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 BX322534.1-201ENST00000635574 241 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 AC215524.1-201ENST00000635696 241 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 AP001267.2-201ENST00000532619 2086 ntBASIC17.1■□□□□ 0.33
SNED1Q8TER0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
SNED1Q8TER0 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC17.1■□□□□ 0.33
SNED1Q8TER0 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 GGTLC4P-201ENST00000402176 664 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SNED1Q8TER0 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 SEPT7-AS1-201ENST00000412856 587 ntTSL 4 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 AC092810.2-201ENST00000431570 362 ntBASIC17.09■□□□□ 0.33
SNED1Q8TER0 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.09■□□□□ 0.33
SNED1Q8TER0 SOD2-205ENST00000444946 917 ntTSL 2 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms