Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 AC061965.1-201ENST00000560524 1465 ntBASIC15.32■□□□□ 0.04
LMO3Q8TAP4 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
LMO3Q8TAP4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AC068760.1-201ENST00000493579 1953 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AGAP12P-201ENST00000585227 2359 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 LBH-202ENST00000401506 485 ntTSL 3 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 RPS9P1-201ENST00000419943 583 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 EIF4HP1-201ENST00000453115 687 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 PFN1P12-201ENST00000455938 534 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 CR392039.2-201ENST00000623182 509 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 KRT8P21-201ENST00000430398 1491 ntBASIC15.31■□□□□ 0.04
LMO3Q8TAP4 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
LMO3Q8TAP4 AC073869.1-201ENST00000415574 2762 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 RN7SKP214-201ENST00000364208 315 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 AC016700.1-201ENST00000429424 312 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 AC006033.1-201ENST00000440505 426 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 GOLGA2P8-201ENST00000505201 779 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 DUT-208ENST00000559540 1441 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 AC135782.3-201ENST00000562782 2105 ntBASIC15.3■□□□□ 0.04
LMO3Q8TAP4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 KC6-205ENST00000599934 556 ntTSL 4 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
LMO3Q8TAP4 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 SALL4P6-201ENST00000429385 1691 ntBASIC15.29■□□□□ 0.04
LMO3Q8TAP4 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
LMO3Q8TAP4 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms