Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 RNA5SP416-201ENST00000516838 111 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 KRT126P-201ENST00000549467 1181 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AC040169.1-201ENST00000565382 521 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AC110048.1-201ENST00000604293 2157 ntBASIC10.81□□□□□ -0.68
NUP35Q8NFH5 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 EMP1-211ENST00000544053 1436 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 PER1-202ENST00000354903 3115 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.68
NUP35Q8NFH5 TRPC7-202ENST00000378459 2406 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 LINC01165-201ENST00000445190 1623 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 AC005237.2-201ENST00000434368 219 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ACTG1P14-201ENST00000446382 1122 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 AC138761.1-201ENST00000584393 385 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 PRSS30P-206ENST00000641773 873 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 DRD5P1-201ENST00000456605 1438 ntBASIC10.8□□□□□ -0.68
NUP35Q8NFH5 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 DNAJC14-202ENST00000317287 2774 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
NUP35Q8NFH5 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
NUP35Q8NFH5 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms