Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 NDUFAB1P1-201ENST00000404262 460 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TISP43-201ENST00000409793 538 ntTSL 4 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AC099336.1-201ENST00000417053 1171 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AL645933.1-201ENST00000440087 609 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AC022210.1-201ENST00000449856 793 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 HNRNPA1P36-201ENST00000521313 955 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RBM8B-201ENST00000555532 525 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 EEF1DP1-201ENST00000585891 896 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AC009884.2-201ENST00000603110 324 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 AC041040.2-201ENST00000622926 2899 ntBASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
TTC9CQ8N5M4 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC244394.1-201ENST00000435000 1665 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC012441.2-201ENST00000444843 739 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC100827.2-201ENST00000563214 1194 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 KLK3-207ENST00000595952 969 ntTSL 3 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AC017083.2-201ENST00000608069 979 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 COX11-210ENST00000639671 696 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PRDM10-202ENST00000358825 6322 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PRDM10-203ENST00000360871 6301 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 BEND3P1-201ENST00000421591 1944 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 MST1P2-201ENST00000457982 2291 ntBASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AMT-239ENST00000636865 1914 ntTSL 5 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
TTC9CQ8N5M4 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms