Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 POLR2LP1-206ENST00000444785 187 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 ISL1-203ENST00000511384 981 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AL359219.1-201ENST00000556311 934 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AL450487.2-201ENST00000615934 407 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 KRT18P44-201ENST00000416086 1285 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 RNASEH2CP1-201ENST00000454281 502 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 AC092910.2-201ENST00000491262 348 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AC078852.1-201ENST00000515842 441 ntTSL 3 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 TBC1D27-202ENST00000424239 1573 ntBASIC11.58□□□□□ -0.56
VPS13CQ709C8 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
VPS13CQ709C8 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
VPS13CQ709C8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SCAMP5-216ENST00000568081 710 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 AC026120.2-201ENST00000617239 309 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 AMT-256ENST00000638063 1783 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SPTLC1P3-201ENST00000403408 259 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 PHBP10-201ENST00000416467 784 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 Z69733.1-201ENST00000445990 632 ntTSL 3 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 CLDN25-201ENST00000453129 754 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 CDIPT-AS1-202ENST00000565014 729 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 AL031673.1-201ENST00000611460 466 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 AC009041.4-201ENST00000620075 638 ntBASIC11.57□□□□□ -0.56
VPS13CQ709C8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 RPL38-202ENST00000439590 431 ntAPPRIS P2 TSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
VPS13CQ709C8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC11.57□□□□□ -0.56
VPS13CQ709C8 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 HNRNPA3P6-201ENST00000472163 1006 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 URGCP-MRPS24-201ENST00000603700 795 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 RPL4P6-201ENST00000438116 1304 ntBASIC11.56□□□□□ -0.56
VPS13CQ709C8 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
VPS13CQ709C8 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC11.56□□□□□ -0.56
VPS13CQ709C8 AL121753.2-201ENST00000624581 1461 ntBASIC11.56□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms