Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TECR-220ENST00000600083 1204 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXR1Q6PIV2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 MIR1908-201ENST00000410394 80 ntBASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 SOCS2P1-201ENST00000417727 557 ntBASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 CSF2RBP1-201ENST00000447905 391 ntBASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 AC068587.3-201ENST00000526613 355 ntBASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 MIR6787-201ENST00000616675 61 ntBASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 PAM-203ENST00000346918 3302 ntTSL 5 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FOXR1Q6PIV2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PER1-202ENST00000354903 3115 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 TARDBPP1-201ENST00000442013 1203 ntBASIC15.12■□□□□ 0.01
FOXR1Q6PIV2 AL355994.2-201ENST00000447882 704 ntBASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms