Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
KCNIP4Q6PIL6 RNF125-201ENST00000217740 6020 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 RPH3A-202ENST00000415485 4452 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 TACC2-209ENST00000369004 3667 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 PRRG4-201ENST00000257836 5530 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 HTR5A-201ENST00000287907 2912 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 VILL-201ENST00000283713 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 ADAMTS20-201ENST00000389420 6076 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 AMDHD2-202ENST00000302956 3273 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CBR1-202ENST00000399191 838 ntTSL 3 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 RN7SL589P-201ENST00000481268 310 ntBASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 IGHV3-62-201ENST00000520057 340 ntBASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 AC034105.1-201ENST00000563488 319 ntBASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 AC040169.1-201ENST00000565382 521 ntBASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 FREM3-201ENST00000329798 6729 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 ZFHX2-202ENST00000419474 9182 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 AGAP12P-201ENST00000585227 2359 ntBASIC11.23□□□□□ -0.61
KCNIP4Q6PIL6 ALKBH5-201ENST00000399138 2748 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 FAHD2A-201ENST00000233379 4757 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 DIP2C-205ENST00000634311 4961 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 PLCXD1-203ENST00000399012 5287 ntAPPRIS P2 TSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ZNF747-201ENST00000252799 3936 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CACNA1C-204ENST00000347598 6655 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 BCL2L1-202ENST00000376055 2383 ntTSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CTNNB1-202ENST00000396183 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 TMBIM1-202ENST00000396809 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 MARK2P9-201ENST00000430958 1727 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 RNA5SP419-201ENST00000515908 135 ntBASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC11.22□□□□□ -0.61
KCNIP4Q6PIL6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms