Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 KRTAP10-9-201ENST00000397911 1171 ntAPPRIS P2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC092810.2-201ENST00000431570 362 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 GULOP-201ENST00000454030 748 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 BCL2L12P1-201ENST00000508390 733 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC113347.2-201ENST00000512350 279 ntBASIC17.72■□□□□ 0.43
RC3H1Q5TC82 SMUG1-221ENST00000514196 553 ntTSL 4 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 AC008906.2-201ENST00000606656 474 ntTSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC17.72■□□□□ 0.43
RC3H1Q5TC82 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 FAM226B-201ENST00000602508 1490 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 USP17L6P-201ENST00000382470 1197 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 GGTLC4P-201ENST00000402176 664 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 AC103563.1-201ENST00000429316 123 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 HNRNPA1P42-201ENST00000458678 957 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 AC120498.7-201ENST00000562876 330 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 MIR4326-201ENST00000582203 59 ntBASIC17.71■□□□□ 0.43
RC3H1Q5TC82 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 PHF23-213ENST00000613632 850 ntTSL 5 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 PNPT1-207ENST00000625249 216 ntTSL 5 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 AL807740.1-201ENST00000636971 567 ntTSL 4 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.71■□□□□ 0.43
RC3H1Q5TC82 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RC3H1Q5TC82 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
RC3H1Q5TC82 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
RC3H1Q5TC82 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.71■□□□□ 0.42
RC3H1Q5TC82 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC17.71■□□□□ 0.42
RC3H1Q5TC82 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AC073347.1-201ENST00000421633 2643 ntBASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AL137244.1-201ENST00000422931 865 ntBASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AC133141.1-201ENST00000443015 339 ntBASIC17.7■□□□□ 0.42
RC3H1Q5TC82 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 GSS-202ENST00000451957 1092 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 SRP14-208ENST00000560773 468 ntTSL 3 BASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AC079414.2-201ENST00000567157 1104 ntBASIC17.7■□□□□ 0.42
RC3H1Q5TC82 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.3 ms