Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 RGS12-202ENST00000338806 3010 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 CD8B2-202ENST00000417670 633 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 TMEM14DP-201ENST00000422205 345 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 GSAP-205ENST00000430584 600 ntTSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 C2orf27AP3-201ENST00000434123 579 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC016694.1-201ENST00000434179 700 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC245100.3-201ENST00000441281 285 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 BCRP2-202ENST00000447763 634 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC026434.2-201ENST00000506094 1078 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC106760.1-201ENST00000508690 800 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 BCRP6-201ENST00000510112 632 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 BCRP7-201ENST00000511549 544 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 GNRHR2-203ENST00000581100 1187 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AL354718.3-201ENST00000616414 581 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 CR382287.1-201ENST00000623954 586 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AL035252.4-201ENST00000624174 288 ntBASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
ATPAF1Q5TC12 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 BOLA2P3-201ENST00000404566 256 ntBASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 SERF2-209ENST00000409646 559 ntTSL 4 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ENPP7P14-201ENST00000621765 1040 ntBASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 RN7SL832P-201ENST00000607781 1756 ntBASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
ATPAF1Q5TC12 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms