Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 FAM86LP-201ENST00000478302 853 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 KRT18P8-201ENST00000581937 1246 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AC093813.1-201ENST00000605066 256 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AL590560.3-201ENST00000623350 461 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 AC004840.1-201ENST00000636359 365 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 MIR193BHG-211ENST00000641433 5365 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 CES1P1-201ENST00000421606 1704 ntBASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
ANKRD55Q3KP44 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 AC024075.2-201ENST00000598112 1473 ntBASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
ANKRD55Q3KP44 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 LINC01271-201ENST00000441214 2250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AL359845.1-201ENST00000458202 1648 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 RN7SKP230-201ENST00000365642 335 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC114501.2-201ENST00000439631 535 ntBASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
ANKRD55Q3KP44 ZNF890P-202ENST00000530367 1156 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms