Protein–RNA interactions for Protein: Q2TBC4

PRICKLE4, Prickle-like protein 4, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE4Q2TBC4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 USP39-220ENST00000613444 2161 ntTSL 2 BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 LINC02486-201ENST00000604157 3000 ntBASIC13.37□□□□□ -0.27
PRICKLE4Q2TBC4 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 KRT8P21-201ENST00000430398 1491 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 MIR1247-201ENST00000408206 136 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SLC16A6P1-201ENST00000413214 1059 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 HMGA1P1-201ENST00000415560 1062 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 MAX-218ENST00000557746 571 ntTSL 4 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 MIR3615-201ENST00000581999 87 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 SHMT1P1-201ENST00000419974 1312 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 LINC00115-201ENST00000473798 1317 ntBASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PRICKLE4Q2TBC4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PRICKLE4Q2TBC4 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms