Protein–RNA interactions for Protein: Q08345

DDR1, Epithelial discoidin domain-containing receptor 1, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1Q08345 MIR4746-201ENST00000579802 71 ntBASIC17.55■□□□□ 0.4
DDR1Q08345 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
DDR1Q08345 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.55■□□□□ 0.4
DDR1Q08345 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
DDR1Q08345 ING5-213ENST00000636051 4199 ntTSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 NECTIN1-203ENST00000341398 1377 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 SIRPB3P-201ENST00000340424 1216 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 NQO2-204ENST00000380454 851 ntTSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC147651.3-201ENST00000429872 731 ntTSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 HIST1H2APS2-201ENST00000454426 370 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC079414.2-201ENST00000567157 1104 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 ZNF571-AS1-204ENST00000587121 822 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 FAAP24-203ENST00000589646 836 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC110057.1-201ENST00000636031 898 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.54■□□□□ 0.4
DDR1Q08345 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.54■□□□□ 0.4
DDR1Q08345 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
DDR1Q08345 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
DDR1Q08345 AC011498.7-201ENST00000624986 2027 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 AC092384.3-202ENST00000564646 2873 ntBASIC17.54■□□□□ 0.4
DDR1Q08345 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
DDR1Q08345 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 MRPL18-201ENST00000367034 978 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 SNORA57-201ENST00000383870 149 ntBASIC17.53■□□□□ 0.4
DDR1Q08345 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC17.53■□□□□ 0.4
DDR1Q08345 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC17.53■□□□□ 0.4
DDR1Q08345 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC17.53■□□□□ 0.4
DDR1Q08345 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC17.53■□□□□ 0.4
DDR1Q08345 MIR4254-201ENST00000581063 76 ntBASIC17.53■□□□□ 0.4
DDR1Q08345 PRMT1P1-201ENST00000604252 1009 ntBASIC17.53■□□□□ 0.4
DDR1Q08345 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC17.53■□□□□ 0.4
DDR1Q08345 AC090510.3-201ENST00000615831 821 ntBASIC17.53■□□□□ 0.4
DDR1Q08345 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
DDR1Q08345 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC17.53■□□□□ 0.4
DDR1Q08345 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC17.53■□□□□ 0.4
DDR1Q08345 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
DDR1Q08345 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
DDR1Q08345 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDR1Q08345 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
DDR1Q08345 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC17.52■□□□□ 0.4
DDR1Q08345 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC17.52■□□□□ 0.4
DDR1Q08345 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDR1Q08345 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
DDR1Q08345 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms