Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CDK3Q00526 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC14.12□□□□□ -0.15
CDK3Q00526 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.12□□□□□ -0.15
CDK3Q00526 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 AC007326.1-201ENST00000604539 458 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 AL353726.2-201ENST00000623259 884 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CDK3Q00526 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.12□□□□□ -0.15
CDK3Q00526 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 LINC00115-201ENST00000473798 1317 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 TUBB8P4-201ENST00000511806 1324 ntBASIC14.12□□□□□ -0.15
CDK3Q00526 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.12□□□□□ -0.15
CDK3Q00526 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CDK3Q00526 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 AC097376.2-205ENST00000610159 5334 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 UFM1-202ENST00000379649 846 ntTSL 4 BASIC14.11□□□□□ -0.15
CDK3Q00526 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 USP17L6P-201ENST00000382470 1197 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC14.11□□□□□ -0.15
CDK3Q00526 AL807761.2-201ENST00000422849 729 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC14.11□□□□□ -0.15
CDK3Q00526 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC14.11□□□□□ -0.15
CDK3Q00526 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 ELP5-212ENST00000574255 671 ntTSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 SIGLEC18P-201ENST00000602271 909 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 AC051619.9-201ENST00000623237 597 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 AC007952.5-201ENST00000572818 1486 ntBASIC14.11□□□□□ -0.15
CDK3Q00526 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.11□□□□□ -0.15
CDK3Q00526 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.11□□□□□ -0.15
CDK3Q00526 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CDK3Q00526 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK3Q00526 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.1□□□□□ -0.15
CDK3Q00526 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CDK3Q00526 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.1□□□□□ -0.15
CDK3Q00526 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CDK3Q00526 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms