Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC13.73□□□□□ -0.21
SKP1P63208 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 AC091544.8-201ENST00000619490 361 ntBASIC13.73□□□□□ -0.21
SKP1P63208 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
SKP1P63208 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.73□□□□□ -0.21
SKP1P63208 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 AC018629.1-201ENST00000623381 1736 ntBASIC13.73□□□□□ -0.21
SKP1P63208 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SKP1P63208 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
SKP1P63208 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.72□□□□□ -0.21
SKP1P63208 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 AC023908.3-201ENST00000564211 3047 ntBASIC13.72□□□□□ -0.21
SKP1P63208 BX640514.1-201ENST00000583223 1918 ntBASIC13.72□□□□□ -0.21
SKP1P63208 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 AC136759.1-202ENST00000530858 2194 ntBASIC13.72□□□□□ -0.21
SKP1P63208 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 CYP4F23P-201ENST00000593402 1579 ntBASIC13.72□□□□□ -0.21
SKP1P63208 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 NKAIN1P1-201ENST00000435754 582 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 AKR7A2P1-201ENST00000460134 915 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AC099548.2-209ENST00000480264 625 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 AC090857.1-201ENST00000527400 390 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 AC003686.1-201ENST00000550956 1034 ntBASIC13.72□□□□□ -0.21
SKP1P63208 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 NDUFV2P1-201ENST00000596415 907 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AL451050.2-201ENST00000606967 682 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AC026740.1-201ENST00000607068 791 ntBASIC13.72□□□□□ -0.21
SKP1P63208 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC13.72□□□□□ -0.21
SKP1P63208 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
SKP1P63208 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
SKP1P63208 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SKP1P63208 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.72□□□□□ -0.21
SKP1P63208 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SKP1P63208 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SKP1P63208 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.71□□□□□ -0.21
SKP1P63208 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SKP1P63208 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SKP1P63208 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SKP1P63208 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms