Protein–RNA interactions for Protein: P58511

SMIM11A, Small integral membrane protein 11A, humanhuman

Predictions only

Length 58 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11AP58511 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 FAM193A-201ENST00000324666 4846 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SMIM11AP58511 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SMIM11AP58511 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.34□□□□□ -0.27
SMIM11AP58511 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SMIM11AP58511 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SMIM11AP58511 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.33□□□□□ -0.27
SMIM11AP58511 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
SMIM11AP58511 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
SMIM11AP58511 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM11AP58511 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM11AP58511 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM11AP58511 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.33□□□□□ -0.27
SMIM11AP58511 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SMIM11AP58511 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM11AP58511 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SMIM11AP58511 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC005498.2-205ENST00000593218 784 ntBASIC13.33□□□□□ -0.28
SMIM11AP58511 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC027601.3-201ENST00000622907 509 ntBASIC13.33□□□□□ -0.28
SMIM11AP58511 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.33□□□□□ -0.28
SMIM11AP58511 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC13.33□□□□□ -0.28
SMIM11AP58511 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
SMIM11AP58511 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
SMIM11AP58511 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
SMIM11AP58511 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM11AP58511 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11AP58511 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 NTNG1-204ENST00000370067 4628 ntTSL 5 BASIC13.32□□□□□ -0.28
SMIM11AP58511 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
SMIM11AP58511 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.32□□□□□ -0.28
SMIM11AP58511 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.32□□□□□ -0.28
SMIM11AP58511 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms