Protein–RNA interactions for Protein: P55211

CASP9, Caspase-9, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP9P55211 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.72□□□□□ -0.21
CASP9P55211 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CASP9P55211 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CASP9P55211 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
CASP9P55211 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.71□□□□□ -0.21
CASP9P55211 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.71□□□□□ -0.21
CASP9P55211 AC011495.1-201ENST00000498085 584 ntBASIC13.71□□□□□ -0.21
CASP9P55211 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.71□□□□□ -0.21
CASP9P55211 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.71□□□□□ -0.21
CASP9P55211 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.71□□□□□ -0.21
CASP9P55211 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.71□□□□□ -0.21
CASP9P55211 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.71□□□□□ -0.21
CASP9P55211 KRT8P4-201ENST00000509735 1454 ntBASIC13.71□□□□□ -0.21
CASP9P55211 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CASP9P55211 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.71□□□□□ -0.21
CASP9P55211 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.71□□□□□ -0.22
CASP9P55211 AC005562.1-201ENST00000583030 3219 ntBASIC13.71□□□□□ -0.22
CASP9P55211 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
CASP9P55211 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.71□□□□□ -0.22
CASP9P55211 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.71□□□□□ -0.22
CASP9P55211 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CASP9P55211 STX3-207ENST00000633708 3111 ntTSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CASP9P55211 SLC35G1-201ENST00000371408 3490 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CASP9P55211 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 AL022313.4-201ENST00000562756 2046 ntBASIC13.7□□□□□ -0.22
CASP9P55211 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.7□□□□□ -0.22
CASP9P55211 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.7□□□□□ -0.22
CASP9P55211 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.7□□□□□ -0.22
CASP9P55211 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CASP9P55211 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.7□□□□□ -0.22
CASP9P55211 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CASP9P55211 IGHV3-72-202ENST00000621503 303 ntBASIC13.7□□□□□ -0.22
CASP9P55211 AC138951.2-201ENST00000623455 1161 ntBASIC13.7□□□□□ -0.22
CASP9P55211 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CASP9P55211 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CASP9P55211 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms