Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NCKAP1LP55160 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ELK2AP-201ENST00000392510 1007 ntBASIC15.69■□□□□ 0.1
NCKAP1LP55160 OR8T1P-201ENST00000421347 918 ntBASIC15.69■□□□□ 0.1
NCKAP1LP55160 Z97180.1-201ENST00000445173 988 ntBASIC15.69■□□□□ 0.1
NCKAP1LP55160 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 PHBP15-201ENST00000574228 665 ntBASIC15.69■□□□□ 0.1
NCKAP1LP55160 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 AF254983.2-201ENST00000612331 135 ntBASIC15.69■□□□□ 0.1
NCKAP1LP55160 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.69■□□□□ 0.1
NCKAP1LP55160 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NCKAP1LP55160 GRK6P1-201ENST00000400595 1711 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 USP39-207ENST00000450066 2086 ntTSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 RPL13AP3-202ENST00000494676 1473 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 PFN2-206ENST00000461930 606 ntTSL 4 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 NUP210P1-202ENST00000504322 710 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MIR4754-201ENST00000582477 89 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 AC020922.3-201ENST00000595064 547 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MIR6769A-201ENST00000617340 73 ntBASIC15.68■□□□□ 0.1
NCKAP1LP55160 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.68■□□□□ 0.1
NCKAP1LP55160 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NCKAP1LP55160 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms