Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CDKN1AP38936 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 RPSAP31-201ENST00000416648 895 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.36□□□□□ -0.43
CDKN1AP38936 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.36□□□□□ -0.43
CDKN1AP38936 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 CFL1-206ENST00000527344 962 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 AP002803.1-201ENST00000528836 498 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 AC135983.4-201ENST00000564116 1262 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 PHBP15-201ENST00000574228 665 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.36□□□□□ -0.43
CDKN1AP38936 AC007881.3-201ENST00000608897 607 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 AC242376.2-201ENST00000619355 883 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.36□□□□□ -0.43
CDKN1AP38936 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CDKN1AP38936 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
CDKN1AP38936 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.36□□□□□ -0.43
CDKN1AP38936 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
CDKN1AP38936 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CDKN1AP38936 AHCYP4-201ENST00000419201 1315 ntBASIC12.36□□□□□ -0.43
CDKN1AP38936 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.36□□□□□ -0.43
CDKN1AP38936 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 AC006504.5-208ENST00000588784 2401 ntBASIC12.35□□□□□ -0.43
CDKN1AP38936 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.35□□□□□ -0.43
CDKN1AP38936 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.35□□□□□ -0.43
CDKN1AP38936 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.35□□□□□ -0.43
CDKN1AP38936 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
CDKN1AP38936 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
CDKN1AP38936 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC12.35□□□□□ -0.43
CDKN1AP38936 AC138894.2-201ENST00000602838 371 ntBASIC12.35□□□□□ -0.43
CDKN1AP38936 AC007326.1-201ENST00000604539 458 ntBASIC12.35□□□□□ -0.43
CDKN1AP38936 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
CDKN1AP38936 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 YRDCP1-201ENST00000621419 643 ntBASIC12.35□□□□□ -0.43
CDKN1AP38936 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.35□□□□□ -0.43
CDKN1AP38936 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms