Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 LINC00567-201ENST00000569854 3409 ntBASIC16.48■□□□□ 0.23
CLCN1P35523 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CLCN1P35523 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.48■□□□□ 0.23
CLCN1P35523 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLCN1P35523 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 DDC-214ENST00000622873 1839 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN1P35523 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 SPDYE19P-201ENST00000338590 713 ntBASIC16.47■□□□□ 0.23
CLCN1P35523 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
CLCN1P35523 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLCN1P35523 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.47■□□□□ 0.23
CLCN1P35523 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
CLCN1P35523 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 MARK2P9-201ENST00000430958 1727 ntBASIC16.47■□□□□ 0.23
CLCN1P35523 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
CLCN1P35523 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
CLCN1P35523 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 SECISBP2-201ENST00000339901 3320 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
CLCN1P35523 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 AC092139.4-201ENST00000624318 2794 ntBASIC16.46■□□□□ 0.23
CLCN1P35523 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 CSNK1G1-205ENST00000607537 2083 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 RN7SL399P-201ENST00000471648 279 ntBASIC16.46■□□□□ 0.23
CLCN1P35523 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.46■□□□□ 0.23
CLCN1P35523 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 TPRX2P-201ENST00000535362 881 ntBASIC16.46■□□□□ 0.23
CLCN1P35523 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.46■□□□□ 0.23
CLCN1P35523 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.46■□□□□ 0.23
CLCN1P35523 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
CLCN1P35523 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 AL662799.1-202ENST00000614205 422 ntBASIC16.46■□□□□ 0.23
CLCN1P35523 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC16.46■□□□□ 0.23
CLCN1P35523 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
CLCN1P35523 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.46■□□□□ 0.23
CLCN1P35523 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
CLCN1P35523 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC16.46■□□□□ 0.22
CLCN1P35523 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
CLCN1P35523 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CLCN1P35523 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms