Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 LILRP2-202ENST00000413572 1383 ntBASIC15.79■□□□□ 0.12
CTGFP29279 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 OLA1P2-201ENST00000395519 1264 ntBASIC15.79■□□□□ 0.12
CTGFP29279 MIR1307-201ENST00000408840 149 ntBASIC15.79■□□□□ 0.12
CTGFP29279 SNRPCP15-201ENST00000424055 192 ntBASIC15.79■□□□□ 0.12
CTGFP29279 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC15.79■□□□□ 0.12
CTGFP29279 AL121894.1-201ENST00000450971 436 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 HFE-209ENST00000461397 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 RN7SL684P-201ENST00000465665 294 ntBASIC15.79■□□□□ 0.12
CTGFP29279 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 AC112250.1-201ENST00000504640 745 ntBASIC15.79■□□□□ 0.12
CTGFP29279 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 RNA5SP420-201ENST00000516997 137 ntBASIC15.79■□□□□ 0.12
CTGFP29279 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC15.79■□□□□ 0.12
CTGFP29279 AC142086.5-202ENST00000562500 217 ntBASIC15.79■□□□□ 0.12
CTGFP29279 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC15.79■□□□□ 0.12
CTGFP29279 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC15.79■□□□□ 0.12
CTGFP29279 AC009041.4-201ENST00000620075 638 ntBASIC15.79■□□□□ 0.12
CTGFP29279 LINC01588-216ENST00000623502 975 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.79■□□□□ 0.12
CTGFP29279 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC15.79■□□□□ 0.12
CTGFP29279 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 AC013268.4-201ENST00000637413 2228 ntBASIC15.79■□□□□ 0.12
CTGFP29279 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
CTGFP29279 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 CASP2-203ENST00000392925 616 ntTSL 3 BASIC15.78■□□□□ 0.12
CTGFP29279 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 SNRPD2P2-201ENST00000473818 333 ntBASIC15.78■□□□□ 0.12
CTGFP29279 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC15.78■□□□□ 0.12
CTGFP29279 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 LINC01444-201ENST00000580867 764 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 AC123912.6-201ENST00000612657 315 ntBASIC15.78■□□□□ 0.12
CTGFP29279 AC026120.2-201ENST00000617239 309 ntBASIC15.78■□□□□ 0.12
CTGFP29279 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 FCGR3A-208ENST00000638849 873 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
CTGFP29279 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 MTHFR-210ENST00000641407 2387 ntBASIC15.78■□□□□ 0.12
CTGFP29279 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CTGFP29279 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 AC103702.1-201ENST00000548801 2630 ntBASIC15.78■□□□□ 0.12
CTGFP29279 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CTGFP29279 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 AC006486.2-201ENST00000624246 2199 ntBASIC15.77■□□□□ 0.12
CTGFP29279 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 KRT8P38-201ENST00000441370 1430 ntBASIC15.77■□□□□ 0.12
CTGFP29279 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.77■□□□□ 0.12
CTGFP29279 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
CTGFP29279 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CTGFP29279 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 153.8 ms