Protein–RNA interactions for Protein: P26022

PTX3, Pentraxin-related protein PTX3, humanhuman

Predicted RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3P26022 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 MIR4783-201ENST00000580343 82 ntBASIC13.87□□□□□ -0.19
PTX3P26022 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.87□□□□□ -0.19
PTX3P26022 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.87□□□□□ -0.19
PTX3P26022 AC021016.3-201ENST00000608367 477 ntBASIC13.87□□□□□ -0.19
PTX3P26022 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PTX3P26022 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PTX3P26022 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 DDC-213ENST00000617822 1809 ntTSL 3 BASIC13.87□□□□□ -0.19
PTX3P26022 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
PTX3P26022 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTX3P26022 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.87□□□□□ -0.19
PTX3P26022 AC092053.3-201ENST00000641308 4975 ntBASIC13.86□□□□□ -0.19
PTX3P26022 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.86□□□□□ -0.19
PTX3P26022 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.86□□□□□ -0.19
PTX3P26022 AC119751.2-201ENST00000504529 210 ntBASIC13.86□□□□□ -0.19
PTX3P26022 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 Z98259.2-201ENST00000641583 609 ntBASIC13.86□□□□□ -0.19
PTX3P26022 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
PTX3P26022 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.86□□□□□ -0.19
PTX3P26022 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC13.86□□□□□ -0.19
PTX3P26022 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
PTX3P26022 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.85□□□□□ -0.19
PTX3P26022 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.85□□□□□ -0.19
PTX3P26022 KLF2P1-201ENST00000447438 1042 ntBASIC13.85□□□□□ -0.19
PTX3P26022 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 TUBB8P8-201ENST00000458717 1058 ntBASIC13.85□□□□□ -0.19
PTX3P26022 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.85□□□□□ -0.19
PTX3P26022 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
PTX3P26022 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.85□□□□□ -0.19
PTX3P26022 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
PTX3P26022 IGHV3-71-201ENST00000523324 359 ntBASIC13.85□□□□□ -0.19
PTX3P26022 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.85□□□□□ -0.19
PTX3P26022 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
PTX3P26022 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms