Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
COL8A2P25067 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.2□□□□□ -0.46
COL8A2P25067 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
COL8A2P25067 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC12.2□□□□□ -0.46
COL8A2P25067 TBC1D3J-201ENST00000620719 1426 ntBASIC12.2□□□□□ -0.46
COL8A2P25067 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.19□□□□□ -0.46
COL8A2P25067 OR2K2-202ENST00000374428 1038 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 AC092506.1-202ENST00000401022 528 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.19□□□□□ -0.46
COL8A2P25067 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.19□□□□□ -0.46
COL8A2P25067 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 MIR4754-201ENST00000582477 89 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC12.19□□□□□ -0.46
COL8A2P25067 MEG3_2.1-201ENST00000611456 105 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 AC007718.1-201ENST00000621078 280 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 AL353726.2-201ENST00000623259 884 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 AC006453.1-201ENST00000636037 1257 ntBASIC12.19□□□□□ -0.46
COL8A2P25067 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
COL8A2P25067 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
COL8A2P25067 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
COL8A2P25067 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.19□□□□□ -0.46
COL8A2P25067 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
COL8A2P25067 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 OR2I1P-209ENST00000641730 5365 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.18□□□□□ -0.46
COL8A2P25067 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.18□□□□□ -0.46
COL8A2P25067 CEP164P1-201ENST00000455142 418 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 RN7SL258P-201ENST00000478664 300 ntBASIC12.18□□□□□ -0.46
COL8A2P25067 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
COL8A2P25067 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
COL8A2P25067 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
COL8A2P25067 SORD2P-201ENST00000558556 1069 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms