Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 INE2-201ENST00000630399 1874 ntBASIC14.6□□□□□ -0.07
VCLP18206 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.6□□□□□ -0.07
VCLP18206 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.6□□□□□ -0.07
VCLP18206 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
VCLP18206 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.59□□□□□ -0.07
VCLP18206 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VCLP18206 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.59□□□□□ -0.07
VCLP18206 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 MIR326-201ENST00000362220 95 ntBASIC14.59□□□□□ -0.07
VCLP18206 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
VCLP18206 GCOM2-201ENST00000509133 1104 ntBASIC14.59□□□□□ -0.07
VCLP18206 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 USB1-203ENST00000539737 1212 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.59□□□□□ -0.07
VCLP18206 BX088702.1-201ENST00000610784 235 ntBASIC14.59□□□□□ -0.07
VCLP18206 AP001002.3-201ENST00000623482 206 ntBASIC14.59□□□□□ -0.07
VCLP18206 AC113189.2-201ENST00000575310 1975 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC14.59□□□□□ -0.07
VCLP18206 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.59□□□□□ -0.07
VCLP18206 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC14.59□□□□□ -0.07
VCLP18206 AL136172.1-201ENST00000598590 1394 ntBASIC14.59□□□□□ -0.07
VCLP18206 AL591122.2-201ENST00000624125 1853 ntBASIC14.59□□□□□ -0.07
VCLP18206 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
VCLP18206 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
VCLP18206 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC14.58□□□□□ -0.07
VCLP18206 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
VCLP18206 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC14.58□□□□□ -0.07
VCLP18206 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.07
VCLP18206 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
VCLP18206 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.58□□□□□ -0.07
VCLP18206 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC14.58□□□□□ -0.07
VCLP18206 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
VCLP18206 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.58□□□□□ -0.08
VCLP18206 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.58□□□□□ -0.08
VCLP18206 GOLGA2P4-201ENST00000441462 777 ntBASIC14.58□□□□□ -0.08
VCLP18206 AL035414.1-201ENST00000451327 857 ntBASIC14.58□□□□□ -0.08
VCLP18206 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.58□□□□□ -0.08
VCLP18206 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 RPSAP36-202ENST00000494591 1261 ntBASIC14.58□□□□□ -0.08
VCLP18206 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
VCLP18206 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.58□□□□□ -0.08
VCLP18206 FAM8A2P-201ENST00000528813 1142 ntBASIC14.58□□□□□ -0.08
VCLP18206 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.58□□□□□ -0.08
VCLP18206 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.58□□□□□ -0.08
VCLP18206 AL358472.3-201ENST00000608147 415 ntBASIC14.58□□□□□ -0.08
VCLP18206 MIR6799-201ENST00000620297 69 ntBASIC14.58□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms