Protein–RNA interactions for Protein: P11229

CHRM1, Muscarinic acetylcholine receptor M1, humanhuman

Predicted RBP Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRM1P11229 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.56■□□□□ 0.08
CHRM1P11229 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC15.56■□□□□ 0.08
CHRM1P11229 CISD2-202ENST00000503643 808 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.56■□□□□ 0.08
CHRM1P11229 MTATP6P9-201ENST00000515039 680 ntBASIC15.56■□□□□ 0.08
CHRM1P11229 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
CHRM1P11229 AL109659.3-201ENST00000624985 950 ntBASIC15.56■□□□□ 0.08
CHRM1P11229 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 CBR3-AS1-204ENST00000453159 1499 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 AC084364.1-201ENST00000551967 1556 ntBASIC15.56■□□□□ 0.08
CHRM1P11229 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC15.56■□□□□ 0.08
CHRM1P11229 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 AC087481.3-201ENST00000602886 1894 ntBASIC15.56■□□□□ 0.08
CHRM1P11229 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.56■□□□□ 0.08
CHRM1P11229 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC15.56■□□□□ 0.08
CHRM1P11229 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 DCAF4-213ENST00000555042 2374 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
CHRM1P11229 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 VENTXP1-201ENST00000569334 2716 ntBASIC15.56■□□□□ 0.08
CHRM1P11229 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CHRM1P11229 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 AMT-224ENST00000635808 1610 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 KRT8P14-201ENST00000414254 1442 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 TRAF3IP3-201ENST00000367023 1065 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 MIR663B-201ENST00000408361 115 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 BTBD6P1-201ENST00000412176 1267 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 CALR4P-201ENST00000431943 946 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 MTX1P1-201ENST00000440904 838 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 HSPB1P2-201ENST00000448722 546 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 OARD1-212ENST00000482515 832 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC15.55■□□□□ 0.08
CHRM1P11229 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.55■□□□□ 0.08
CHRM1P11229 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 AC242628.1-201ENST00000606810 391 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC15.55■□□□□ 0.08
CHRM1P11229 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC15.55■□□□□ 0.08
CHRM1P11229 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.55■□□□□ 0.08
CHRM1P11229 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC15.55■□□□□ 0.08
CHRM1P11229 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CHRM1P11229 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CHRM1P11229 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRM1P11229 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CHRM1P11229 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.54■□□□□ 0.08
CHRM1P11229 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CHRM1P11229 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.54■□□□□ 0.08
CHRM1P11229 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms