Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.29□□□□□ -0.12
CAPN1P07384 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 MTX1P1-201ENST00000440904 838 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 AC104306.2-201ENST00000451877 341 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 FTLP10-202ENST00000505798 471 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 AL391280.1-201ENST00000506969 1062 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
CAPN1P07384 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 AP006547.1-201ENST00000563435 692 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CAPN1P07384 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC14.29□□□□□ -0.12
CAPN1P07384 AP001002.3-201ENST00000623482 206 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 HSPA8P5-201ENST00000456928 2069 ntBASIC14.29□□□□□ -0.12
CAPN1P07384 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.29□□□□□ -0.12
CAPN1P07384 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CAPN1P07384 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CAPN1P07384 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 RPS3-201ENST00000278572 907 ntTSL 3 BASIC14.28□□□□□ -0.12
CAPN1P07384 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.28□□□□□ -0.12
CAPN1P07384 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.28□□□□□ -0.12
CAPN1P07384 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC14.28□□□□□ -0.12
CAPN1P07384 KHSRPP1-201ENST00000427983 1768 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 FAM8A4P-201ENST00000435433 1213 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 AL023775.1-201ENST00000454907 1746 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 KRT8P13-201ENST00000463294 1010 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 TCAM1P-207ENST00000485295 1537 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CAPN1P07384 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 AL096828.3-201ENST00000615354 462 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 AL008638.5-201ENST00000623814 1298 ntBASIC14.28□□□□□ -0.12
CAPN1P07384 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.28□□□□□ -0.12
CAPN1P07384 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
CAPN1P07384 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CAPN1P07384 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.27□□□□□ -0.12
CAPN1P07384 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.27□□□□□ -0.12
CAPN1P07384 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.27□□□□□ -0.12
CAPN1P07384 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms