Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.92□□□□□ -0.34
APOA1P02647 HSPA8P5-201ENST00000456928 2069 ntBASIC12.92□□□□□ -0.34
APOA1P02647 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 MAML3-203ENST00000509479 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
APOA1P02647 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
APOA1P02647 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
APOA1P02647 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
APOA1P02647 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.92□□□□□ -0.34
APOA1P02647 RPL13P2-201ENST00000440687 659 ntBASIC12.92□□□□□ -0.34
APOA1P02647 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.92□□□□□ -0.34
APOA1P02647 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC12.92□□□□□ -0.34
APOA1P02647 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.92□□□□□ -0.34
APOA1P02647 KRT8P48-201ENST00000515599 1220 ntBASIC12.92□□□□□ -0.34
APOA1P02647 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
APOA1P02647 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 LITAF-210ENST00000571976 548 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 LITAF-214ENST00000574703 486 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 AL133215.2-201ENST00000609242 977 ntBASIC12.92□□□□□ -0.34
APOA1P02647 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 AC012313.10-201ENST00000623509 926 ntBASIC12.92□□□□□ -0.34
APOA1P02647 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC12.92□□□□□ -0.34
APOA1P02647 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 FBRSL1-205ENST00000542061 3175 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 PCDHA6-201ENST00000378126 3267 ntBASIC12.92□□□□□ -0.34
APOA1P02647 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC12.92□□□□□ -0.34
APOA1P02647 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
APOA1P02647 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
APOA1P02647 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
APOA1P02647 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 ESR2-213ENST00000557772 5458 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 CARS-214ENST00000529772 2637 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 AC007967.2-201ENST00000432613 625 ntBASIC12.91□□□□□ -0.34
APOA1P02647 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC12.91□□□□□ -0.34
APOA1P02647 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC12.91□□□□□ -0.34
APOA1P02647 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC12.91□□□□□ -0.34
APOA1P02647 AC145285.3-201ENST00000564603 959 ntBASIC12.91□□□□□ -0.34
APOA1P02647 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 PRR29-209ENST00000582540 967 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
APOA1P02647 AC092364.2-202ENST00000597012 1073 ntBASIC12.91□□□□□ -0.34
APOA1P02647 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC12.91□□□□□ -0.34
APOA1P02647 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 AC092902.6-201ENST00000641783 218 ntBASIC12.91□□□□□ -0.34
APOA1P02647 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 KDM2A-210ENST00000529006 6967 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 SH3RF2-206ENST00000511217 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 EXOC5-202ENST00000413566 8513 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
APOA1P02647 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
APOA1P02647 INPP5J-201ENST00000331075 3347 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 TRPV1-209ENST00000576351 2525 ntTSL 5 BASIC12.91□□□□□ -0.34
APOA1P02647 RBM12-202ENST00000374104 5213 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.91□□□□□ -0.34
APOA1P02647 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
APOA1P02647 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
APOA1P02647 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms