Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 BCL2-203ENST00000589955 5011 ntBASIC18.46■□□□□ 0.55
LTN1O94822 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LTN1O94822 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.54
LTN1O94822 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.54
LTN1O94822 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 TMEM14B-215ENST00000481240 1032 ntTSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 C3orf38-204ENST00000486971 1259 ntTSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC18.45■□□□□ 0.54
LTN1O94822 RN7SL134P-201ENST00000579756 303 ntBASIC18.45■□□□□ 0.54
LTN1O94822 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
LTN1O94822 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC18.45■□□□□ 0.54
LTN1O94822 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 LINC00552-201ENST00000625151 2579 ntBASIC18.45■□□□□ 0.54
LTN1O94822 AC020931.1-201ENST00000589622 1346 ntBASIC18.45■□□□□ 0.54
LTN1O94822 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
LTN1O94822 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 AL513165.1-201ENST00000413915 289 ntTSL 3 BASIC18.45■□□□□ 0.54
LTN1O94822 AC041040.1-201ENST00000425197 460 ntBASIC18.45■□□□□ 0.54
LTN1O94822 RPSAP12-201ENST00000435879 888 ntBASIC18.45■□□□□ 0.54
LTN1O94822 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 HNRNPA3P6-201ENST00000472163 1006 ntBASIC18.45■□□□□ 0.54
LTN1O94822 METTL7AP1-201ENST00000547343 496 ntBASIC18.45■□□□□ 0.54
LTN1O94822 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 AC120498.7-201ENST00000562876 330 ntBASIC18.45■□□□□ 0.54
LTN1O94822 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC18.45■□□□□ 0.54
LTN1O94822 DGAT2L7P-201ENST00000602462 744 ntBASIC18.45■□□□□ 0.54
LTN1O94822 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC18.45■□□□□ 0.54
LTN1O94822 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
LTN1O94822 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 AL357373.1-201ENST00000394974 322 ntBASIC18.44■□□□□ 0.54
LTN1O94822 PHBP10-201ENST00000416467 784 ntBASIC18.44■□□□□ 0.54
LTN1O94822 RPL18AP16-201ENST00000424057 531 ntBASIC18.44■□□□□ 0.54
LTN1O94822 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
LTN1O94822 CHIC2-204ENST00000512964 711 ntTSL 5 BASIC18.44■□□□□ 0.54
LTN1O94822 RNA5SP420-201ENST00000516997 137 ntBASIC18.44■□□□□ 0.54
LTN1O94822 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 HNRNPA1P16-201ENST00000575692 955 ntBASIC18.44■□□□□ 0.54
LTN1O94822 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 AC090643.2-201ENST00000623442 2029 ntBASIC18.44■□□□□ 0.54
LTN1O94822 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC18.44■□□□□ 0.54
LTN1O94822 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC18.44■□□□□ 0.54
LTN1O94822 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LTN1O94822 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
LTN1O94822 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC18.43■□□□□ 0.54
LTN1O94822 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.43■□□□□ 0.54
LTN1O94822 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
LTN1O94822 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
LTN1O94822 AC007279.1-201ENST00000448547 837 ntBASIC18.43■□□□□ 0.54
LTN1O94822 AC025594.1-201ENST00000469533 543 ntBASIC18.43■□□□□ 0.54
LTN1O94822 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC18.43■□□□□ 0.54
LTN1O94822 AC026470.4-201ENST00000565812 308 ntTSL 3 BASIC18.43■□□□□ 0.54
LTN1O94822 FBXO36P1-201ENST00000579006 471 ntBASIC18.43■□□□□ 0.54
LTN1O94822 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.43■□□□□ 0.54
LTN1O94822 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC18.43■□□□□ 0.54
LTN1O94822 AC011462.4-201ENST00000616866 449 ntBASIC18.43■□□□□ 0.54
LTN1O94822 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.43■□□□□ 0.54
LTN1O94822 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC18.43■□□□□ 0.54
LTN1O94822 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LTN1O94822 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms