Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRIM3O75382 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 AC015909.5-201ENST00000624336 2266 ntBASIC13.55□□□□□ -0.24
TRIM3O75382 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TRIM3O75382 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.55□□□□□ -0.24
TRIM3O75382 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 POM121L10P-201ENST00000436994 1285 ntBASIC13.55□□□□□ -0.24
TRIM3O75382 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 AC104306.2-201ENST00000451877 341 ntBASIC13.55□□□□□ -0.24
TRIM3O75382 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.55□□□□□ -0.24
TRIM3O75382 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC13.55□□□□□ -0.24
TRIM3O75382 AC008825.2-201ENST00000603374 718 ntBASIC13.55□□□□□ -0.24
TRIM3O75382 AL008638.5-201ENST00000623814 1298 ntBASIC13.55□□□□□ -0.24
TRIM3O75382 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 CFAP65-203ENST00000409865 2769 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRIM3O75382 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
TRIM3O75382 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC13.55□□□□□ -0.24
TRIM3O75382 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
TRIM3O75382 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 SHC1P1-201ENST00000425230 1745 ntBASIC13.54□□□□□ -0.24
TRIM3O75382 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC13.54□□□□□ -0.24
TRIM3O75382 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 KRTAP10-13P-201ENST00000412914 571 ntBASIC13.54□□□□□ -0.24
TRIM3O75382 AC006033.1-201ENST00000440505 426 ntBASIC13.54□□□□□ -0.24
TRIM3O75382 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.54□□□□□ -0.24
TRIM3O75382 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM3O75382 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC13.54□□□□□ -0.24
TRIM3O75382 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 AL118558.3-201ENST00000607414 1079 ntBASIC13.54□□□□□ -0.24
TRIM3O75382 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRIM3O75382 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRIM3O75382 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRIM3O75382 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms