Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AL139400.1-201ENST00000366220 510 ntBASIC11.82□□□□□ -0.52
SSSCA1O60232 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.82□□□□□ -0.52
SSSCA1O60232 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC11.82□□□□□ -0.52
SSSCA1O60232 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.82□□□□□ -0.52
SSSCA1O60232 RPL13AP25-201ENST00000484130 612 ntBASIC11.82□□□□□ -0.52
SSSCA1O60232 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 GCOM2-201ENST00000509133 1104 ntBASIC11.82□□□□□ -0.52
SSSCA1O60232 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AC027369.6-201ENST00000525520 931 ntBASIC11.82□□□□□ -0.52
SSSCA1O60232 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AL603764.1-201ENST00000636452 321 ntBASIC11.82□□□□□ -0.52
SSSCA1O60232 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 OS9-206ENST00000435406 2346 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 C1orf167-202ENST00000433342 4545 ntAPPRIS P5 TSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
SSSCA1O60232 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
SSSCA1O60232 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
SSSCA1O60232 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
SSSCA1O60232 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 PRKD1-201ENST00000331968 3726 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AC009474.1-201ENST00000455096 1565 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL391647.1-201ENST00000395664 511 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
SSSCA1O60232 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AC114501.2-201ENST00000439631 535 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AC125807.1-201ENST00000483097 614 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 ZNF890P-202ENST00000530367 1156 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 VPS18-202ENST00000558474 873 ntTSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL844908.2-201ENST00000609461 460 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 AC007431.3-201ENST00000623221 587 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 TP73-201ENST00000346387 4854 ntTSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC11.81□□□□□ -0.52
SSSCA1O60232 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC11.81□□□□□ -0.52
SSSCA1O60232 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC11.81□□□□□ -0.52
SSSCA1O60232 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AL138725.1-201ENST00000407347 1314 ntBASIC11.81□□□□□ -0.52
SSSCA1O60232 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
SSSCA1O60232 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms