Protein–RNA interactions for Protein: O43837

IDH3B, Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3BO43837 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.38□□□□□ -0.27
IDH3BO43837 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.38□□□□□ -0.27
IDH3BO43837 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC13.38□□□□□ -0.27
IDH3BO43837 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
IDH3BO43837 AL138725.1-201ENST00000407347 1314 ntBASIC13.38□□□□□ -0.27
IDH3BO43837 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC13.38□□□□□ -0.27
IDH3BO43837 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 SUCO-202ENST00000367723 5916 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 AC087499.6-201ENST00000411576 835 ntBASIC13.37□□□□□ -0.27
IDH3BO43837 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.37□□□□□ -0.27
IDH3BO43837 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.37□□□□□ -0.27
IDH3BO43837 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.37□□□□□ -0.27
IDH3BO43837 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.37□□□□□ -0.27
IDH3BO43837 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 AC016397.2-201ENST00000624848 1985 ntBASIC13.37□□□□□ -0.27
IDH3BO43837 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC13.37□□□□□ -0.27
IDH3BO43837 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
IDH3BO43837 PLXNA1-201ENST00000393409 9066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
IDH3BO43837 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 AC020910.6-201ENST00000623084 1459 ntBASIC13.36□□□□□ -0.27
IDH3BO43837 MIR497HG-202ENST00000572453 3838 ntBASIC13.36□□□□□ -0.27
IDH3BO43837 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 DNM3-202ENST00000367731 7613 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 RN7SL832P-201ENST00000607781 1756 ntBASIC13.36□□□□□ -0.27
IDH3BO43837 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
IDH3BO43837 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
IDH3BO43837 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
IDH3BO43837 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
IDH3BO43837 HNRNPA1P40-201ENST00000426371 1278 ntBASIC13.36□□□□□ -0.27
IDH3BO43837 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.36□□□□□ -0.27
IDH3BO43837 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms