Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 AP000553.2-201ENST00000609038 441 ntBASIC17.4■□□□□ 0.38
RGPD3A6NKT7 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RGPD3A6NKT7 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.38
RGPD3A6NKT7 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC17.39■□□□□ 0.38
RGPD3A6NKT7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
RGPD3A6NKT7 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC17.39■□□□□ 0.38
RGPD3A6NKT7 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
RGPD3A6NKT7 ATF4P4-201ENST00000393544 1930 ntBASIC17.39■□□□□ 0.38
RGPD3A6NKT7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 SOD1-202ENST00000389995 865 ntTSL 3 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AP001092.1-201ENST00000433606 469 ntTSL 3 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 PRSS45-201ENST00000442359 687 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 SLC22A18AS-202ENST00000526203 664 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 PMM2-216ENST00000569958 698 ntTSL 2 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AL109983.1-201ENST00000603234 646 ntBASIC17.39■□□□□ 0.37
RGPD3A6NKT7 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AL022313.4-201ENST00000562756 2046 ntBASIC17.39■□□□□ 0.37
RGPD3A6NKT7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AC090505.1-201ENST00000430515 1834 ntBASIC17.39■□□□□ 0.37
RGPD3A6NKT7 RN7SL832P-201ENST00000607781 1756 ntBASIC17.39■□□□□ 0.37
RGPD3A6NKT7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 AL162727.3-201ENST00000635661 2787 ntBASIC17.39■□□□□ 0.37
RGPD3A6NKT7 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RGPD3A6NKT7 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AL513477.1-201ENST00000602865 2407 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 MYL3-201ENST00000292327 924 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 DIS3L2P1-201ENST00000509197 559 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC246817.2-204ENST00000517984 562 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC136698.1-201ENST00000558110 546 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC048382.4-201ENST00000559065 546 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 MIR4459-201ENST00000581837 66 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AL645940.1-201ENST00000606432 594 ntTSL 2 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC006486.2-201ENST00000624246 2199 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PAX5-204ENST00000377852 1472 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 TUBB8P4-201ENST00000511806 1324 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PGAM1P10-201ENST00000402426 761 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 LINC01508-201ENST00000425666 1013 ntTSL 3 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 RN7SL789P-201ENST00000478944 293 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC007622.1-201ENST00000488371 535 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PDPN-208ENST00000509009 571 ntTSL 4 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 MIR4526-201ENST00000583168 87 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC090616.6-202ENST00000583601 1088 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC136475.9-201ENST00000605240 497 ntBASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 AC005609.1-201ENST00000625195 617 ntTSL 5 BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RGPD3A6NKT7 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 LINC02199-201ENST00000506655 2702 ntBASIC17.37■□□□□ 0.37
RGPD3A6NKT7 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 BX640514.1-201ENST00000583223 1918 ntBASIC17.37■□□□□ 0.37
RGPD3A6NKT7 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 CA6-201ENST00000377436 942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 CA6-202ENST00000377442 747 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RGPD3A6NKT7 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms