Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AL161932.2-201ENST00000435436 679 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 RN7SL8P-201ENST00000461771 266 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC130709.1-201ENST00000484779 1212 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC007881.3-201ENST00000608897 607 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 RN7SL736P-201ENST00000613111 269 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AL136379.1-201ENST00000623471 2642 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 BRD7P5-201ENST00000299197 1822 ntBASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.34□□□□□ -0.11
TBC1D3FA6NER0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TBC1D3FA6NER0 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TBC1D3FA6NER0 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TBC1D3FA6NER0 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
TBC1D3FA6NER0 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 RPSAP31-201ENST00000416648 895 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 NDUFS6P1-201ENST00000485187 316 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 RN7SL81P-201ENST00000493781 261 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AC022447.6-201ENST00000515522 438 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 NPM1P43-201ENST00000558669 786 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 MIR6842-201ENST00000612539 65 ntBASIC14.33□□□□□ -0.12
TBC1D3FA6NER0 AP003419.4-201ENST00000616071 517 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms