Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AL355102.3-201ENST00000554299 1678 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 DNM3-201ENST00000355305 3280 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 INE1-201ENST00000456273 945 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AL139353.2-202ENST00000502430 1213 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AC140912.1-201ENST00000577171 1054 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 AL109620.1-201ENST00000618738 1197 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 AJ011932.1-201ENST00000621707 465 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 ANKRD30BP2-201ENST00000435744 1610 ntBASIC15.35■□□□□ 0.05
RCCD1A6NED2 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
RCCD1A6NED2 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC15.35■□□□□ 0.05
RCCD1A6NED2 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PLAT-201ENST00000220809 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 CD8B2-202ENST00000417670 633 ntBASIC15.34■□□□□ 0.05
RCCD1A6NED2 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 FAM8A4P-201ENST00000435433 1213 ntBASIC15.34■□□□□ 0.05
RCCD1A6NED2 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 AP003969.2-201ENST00000623739 2275 ntBASIC15.34■□□□□ 0.05
RCCD1A6NED2 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC15.34■□□□□ 0.05
RCCD1A6NED2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
RCCD1A6NED2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms