Protein–RNA interactions for Protein: Q9Y4P9

SPEF1, Sperm flagellar protein 1, humanhuman

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPEF1Q9Y4P9 VCP-201ENST00000358901 4370 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 RNU1-114P-201ENST00000365297 166 ntBASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 TMEM14DP-201ENST00000422205 345 ntBASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 ACA64.2-201ENST00000459014 129 ntBASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 AC132938.4-201ENST00000623835 848 ntBASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13.17□□□□□ -0.3
SPEF1Q9Y4P9 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC079776.1-201ENST00000401540 1152 ntBASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC007551.1-201ENST00000457394 519 ntBASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 AC079316.1-201ENST00000548397 411 ntBASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 MIR6805-201ENST00000615055 62 ntBASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 KRT8P44-201ENST00000441609 1350 ntBASIC13.16□□□□□ -0.3
SPEF1Q9Y4P9 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms