Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SDC3-201ENST00000336798 6392 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 NFKBIZ-202ENST00000326172 3923 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TMEM14DP-201ENST00000422205 345 ntBASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AL596325.1-201ENST00000563991 1082 ntBASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 BTNL10-201ENST00000595971 695 ntBASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
POLR1DQ9Y2S0 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 KIF21B-202ENST00000360529 5389 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 PITPNM3-202ENST00000421306 6945 ntAPPRIS ALT2 TSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC092933.1-201ENST00000393644 945 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC112492.5-201ENST00000421897 457 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 COX5BP1-201ENST00000507622 393 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 ALG3P1-201ENST00000508806 1114 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 FUZ-207ENST00000526575 482 ntTSL 4 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC103988.2-201ENST00000561804 725 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 MST1P2-201ENST00000457982 2291 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 TRAK1-210ENST00000613405 4672 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.97□□□□□ -0.33
POLR1DQ9Y2S0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms