Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC010970.1-201ENST00000445125 1848 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 GABPB1-201ENST00000220429 2726 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 BRF1-202ENST00000379932 884 ntTSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AL627223.1-201ENST00000416693 442 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 SPDYE7P-202ENST00000420373 878 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 GPS2P2-201ENST00000430745 888 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AK2P2-201ENST00000439142 405 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 DPY19L2P2-205ENST00000439473 3994 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC010336.1-201ENST00000539278 4739 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AL022313.4-201ENST00000562756 2046 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AC010336.2-201ENST00000564226 506 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 AL445250.1-201ENST00000641671 2259 ntBASIC12.92□□□□□ -0.34
SSR3Q9UNL2 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 ETS2-201ENST00000360214 3936 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
SSR3Q9UNL2 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AC064801.2-201ENST00000625052 1303 ntBASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AC141928.1-201ENST00000511928 4525 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AGAP2-203ENST00000547588 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.91□□□□□ -0.34
SSR3Q9UNL2 AC026410.3-201ENST00000514280 936 ntBASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms