Protein–RNA interactions for Protein: Q9UJ99

CDH22, Cadherin-22, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH22Q9UJ99 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 LINC00634-202ENST00000505157 222 ntBASIC15.28■□□□□ 0.04
CDH22Q9UJ99 ALG1L6P-201ENST00000515248 758 ntBASIC15.28■□□□□ 0.04
CDH22Q9UJ99 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH22Q9UJ99 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 RN7SL81P-201ENST00000493781 261 ntBASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AC068397.2-201ENST00000558742 341 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AC008758.6-201ENST00000598753 588 ntAPPRIS P1 TSL 4 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 AL022334.2-201ENST00000610000 484 ntBASIC15.27■□□□□ 0.04
CDH22Q9UJ99 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
CDH22Q9UJ99 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
CDH22Q9UJ99 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms