Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 AL353770.1-201ENST00000614915 403 ntBASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AL021997.3-201ENST00000621053 557 ntAPPRIS P1 TSL 4 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 AC079336.7-201ENST00000623428 1078 ntBASIC14.44□□□□□ -0.1
SPASTQ9UBP0 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
SPASTQ9UBP0 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 POU5F1P2-201ENST00000521750 823 ntBASIC14.43□□□□□ -0.1
SPASTQ9UBP0 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 RBM8B-201ENST00000555532 525 ntBASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC020922.3-201ENST00000595064 547 ntBASIC14.43□□□□□ -0.1
SPASTQ9UBP0 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC14.43□□□□□ -0.1
SPASTQ9UBP0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 AC136759.1-202ENST00000530858 2194 ntBASIC14.43□□□□□ -0.1
SPASTQ9UBP0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
SPASTQ9UBP0 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 GGCT-203ENST00000409144 836 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.42□□□□□ -0.1
SPASTQ9UBP0 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms