Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 IQSEC3P1-201ENST00000538799 536 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC073352.2-201ENST00000609385 439 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC007718.1-201ENST00000621078 280 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HDAC6Q9UBN7 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 AC026803.1-201ENST00000569130 274 ntBASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 RN7SL555P-201ENST00000584742 339 ntBASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 COX10-AS1-206ENST00000602743 576 ntTSL 5 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 AL109837.1-201ENST00000603272 613 ntBASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 MEG3_2.1-201ENST00000611456 105 ntBASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HDAC6Q9UBN7 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 AC092135.3-201ENST00000624151 1846 ntBASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
HDAC6Q9UBN7 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 AL627231.1-201ENST00000394467 1125 ntBASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 PEX13-203ENST00000414712 1014 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 RPL17P11-201ENST00000417593 544 ntBASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 RBM8B-201ENST00000555532 525 ntBASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 STUB1-204ENST00000564370 875 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 AC133540.1-201ENST00000620845 1019 ntBASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 STK26-204ENST00000481105 1835 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 BEND3P1-201ENST00000421591 1944 ntBASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC16.33■□□□□ 0.2
HDAC6Q9UBN7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms