Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC15.67■□□□□ 0.1
TRMT13Q9NUP7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 FUCA1P1-201ENST00000374476 1351 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 GNAO1-205ENST00000563661 1351 ntTSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 KRT18P46-201ENST00000435568 1279 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC013553.1-201ENST00000560906 267 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 USB1-205ENST00000561743 1135 ntTSL 3 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 NT5C-204ENST00000578337 582 ntTSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC008972.2-201ENST00000606587 494 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC104506.1-201ENST00000609247 429 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AL359091.4-201ENST00000610052 409 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC091769.1-201ENST00000619576 568 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 MIR6746-201ENST00000620971 63 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 NORAD-201ENST00000565493 5339 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC232323.1-201ENST00000540724 2099 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 AC064801.2-201ENST00000625052 1303 ntBASIC15.66■□□□□ 0.1
TRMT13Q9NUP7 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 LINC00265-2P-201ENST00000413372 782 ntBASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 AC244197.1-201ENST00000456494 951 ntBASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 ZNF879-202ENST00000519896 543 ntTSL 4 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 EIF5AP2-201ENST00000585668 1047 ntBASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 AP003392.6-201ENST00000607709 325 ntBASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 AC006483.2-201ENST00000609813 515 ntBASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 BLACE-202ENST00000616210 540 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.65■□□□□ 0.1
TRMT13Q9NUP7 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms