Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 MIR602-201ENST00000384960 98 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 IGLV2-33-201ENST00000390302 412 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 OR2W2P-201ENST00000406313 909 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AL162595.1-201ENST00000429227 868 ntTSL 5 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AL355075.5-201ENST00000553568 890 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AC091736.1-201ENST00000609370 305 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 MIR7704-201ENST00000610524 59 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AC245369.8-201ENST00000636589 306 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AC092135.3-201ENST00000624151 1846 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 AC015909.5-201ENST00000624336 2266 ntBASIC13.01□□□□□ -0.33
CHD8Q9HCK8 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC13.01□□□□□ -0.33
CHD8Q9HCK8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 TBC1D27-202ENST00000424239 1573 ntBASIC13□□□□□ -0.33
CHD8Q9HCK8 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 AC093495.1-201ENST00000420253 1067 ntTSL 4 BASIC13□□□□□ -0.33
CHD8Q9HCK8 AP003062.1-201ENST00000528497 762 ntTSL 3 BASIC13□□□□□ -0.33
CHD8Q9HCK8 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC13□□□□□ -0.33
CHD8Q9HCK8 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 HAX1-201ENST00000328703 1227 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC13□□□□□ -0.33
CHD8Q9HCK8 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 AC008894.2-202ENST00000599676 1027 ntTSL 3 BASIC13□□□□□ -0.33
CHD8Q9HCK8 LINC00869-208ENST00000621156 737 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13□□□□□ -0.33
CHD8Q9HCK8 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
CHD8Q9HCK8 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
CHD8Q9HCK8 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SMIM22-206ENST00000589327 629 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MIR941-1-201ENST00000636396 72 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 IFNLR1-203ENST00000374418 674 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MIR766-201ENST00000390223 111 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 SNORD88B-201ENST00000408454 91 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
CHD8Q9HCK8 MRPS16P3-201ENST00000415961 374 ntBASIC12.99□□□□□ -0.33
CHD8Q9HCK8 TMEM256P1-201ENST00000430550 340 ntBASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms