Protein–RNA interactions for Protein: Q9BSM1

PCGF1, Polycomb group RING finger protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF1Q9BSM1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 Z82170.1-201ENST00000625081 3192 ntBASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
PCGF1Q9BSM1 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AC089987.1-201ENST00000551654 2209 ntBASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 BAK1-202ENST00000374467 2136 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 MIR1247-201ENST00000408206 136 ntBASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 TLE1P1-201ENST00000422965 589 ntBASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 APOA2-204ENST00000464492 530 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 AC007663.3-201ENST00000609632 465 ntBASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
PCGF1Q9BSM1 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AL138725.1-201ENST00000407347 1314 ntBASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
PCGF1Q9BSM1 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms