Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 AGER-206ENST00000375070 1463 ntTSL 5 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CMSS1Q9BQ75 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AL138725.1-201ENST00000407347 1314 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 ABCB8-202ENST00000358849 4683 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 ACTBP8-201ENST00000403258 1108 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 METTL21AP1-201ENST00000438852 635 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 FO681548.1-201ENST00000455617 1132 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 KRT18P25-201ENST00000508931 1278 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 GCOM2-201ENST00000509133 1104 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AL359711.2-201ENST00000563105 872 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 AC090643.2-201ENST00000623442 2029 ntBASIC12.44□□□□□ -0.42
CMSS1Q9BQ75 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 AC023794.5-201ENST00000564380 2157 ntBASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CMSS1Q9BQ75 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms