Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
S1PR3Q99500 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.99□□□□□ -0.49
S1PR3Q99500 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
S1PR3Q99500 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC004945.1-201ENST00000416738 983 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 U91328.1-201ENST00000437528 223 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.99□□□□□ -0.49
S1PR3Q99500 CROCCP4-201ENST00000457096 498 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
S1PR3Q99500 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
S1PR3Q99500 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
S1PR3Q99500 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC11.99□□□□□ -0.49
S1PR3Q99500 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC008825.2-201ENST00000603374 718 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 AC244669.2-201ENST00000612320 853 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 AC138951.2-201ENST00000623455 1161 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 AC006453.4-201ENST00000636949 1252 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC009093.10-201ENST00000641956 1442 ntBASIC11.99□□□□□ -0.49
S1PR3Q99500 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC11.99□□□□□ -0.49
S1PR3Q99500 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
S1PR3Q99500 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
S1PR3Q99500 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 HPD-204ENST00000543163 1709 ntTSL 5 BASIC11.98□□□□□ -0.49
S1PR3Q99500 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.98□□□□□ -0.49
S1PR3Q99500 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
S1PR3Q99500 AL590440.2-201ENST00000641973 1595 ntBASIC11.98□□□□□ -0.49
S1PR3Q99500 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
S1PR3Q99500 SNX21-203ENST00000372541 771 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC11.98□□□□□ -0.49
S1PR3Q99500 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms